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Effects of Substrate Hydrophobicity/Hydrophilicity on Height Measurement of Individual DNA Molecules |
WANG Hua-Bin 1,5;ZHOU Xing-Fei 2;AN Hong-Jie 3, GUO Yun-Chang 1;SUN Jie-Lin 4;ZHANG Yi 1; HU Jun 1,4 |
1Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai 2018002Department of Physics, Ningbo University, Ningbo 3152113Tianjin University of Science and Technology, Tianjin 3000404Bio-X Life Science Research Center, Shanghai Jiao TongUniversity, Shanghai 2000305Graduate School of the Chinese Academy of Sciences, Beijing 100080 |
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Cite this article: |
WANG Hua-Bin, ZHOU Xing-Fei, AN Hong-Jie et al 2007 Chin. Phys. Lett. 24 644-647 |
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Abstract Effects of substrate hydrophobicity/hydrophilicity on height measurement of individual ds-DNA molecules are investigated with tapping mode atomic force microscopy (TMAFM) and vibrating mode scanning polarization force microscopy (VSPFM). The measured heights of ds-DNA on hydrophobic highly oriented pyrolytic graphite (HOPG) are remarkably less than those on hydrophilic bare mica and Ni 2+ treated mica in both TMAFM and VSPFM. By analysing the results, we propose that the hydrophobicity/hydrophilicity of substrate can greatly influence the height measurement of DNA molecules.
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Keywords:
06.60.Ei
07.79.Lh
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Received: 30 October 2006
Published: 08 February 2007
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[1] Konig P and Richmond T J 1993 J. Mol. Biol. 233 139 [2] Morikis D and Lambris J D 2004 Trends. Immunol. 25 700 [3] Wilchek M et al 2006 Immunol. Lett. 103 27 [4] Binnig G et al 1986 Phys. Rev. Lett. 56 930 [5] Wei Z and Zhao Y P 2004 Chin. Phys. Lett. 21 616 [6] Hu J et al 1996 Langmuir 12 1697 [7] Gaczynska M et al 2004 Proc. Natl. Acad. Sci. U.S.A. 101 17952 [8] Alessandrini A and Facci P 2005 Meas. Sci. Technol. 16 R65 [9] Muller D J et al 1997 J. Struct. Biol. 119 172 [10] Kowalewski T and Holtzman DM 1999 Proc. Natl. Acad.Sci. U.S.A. 96 3688 [11] Zhang F et al 2006 Angew. Chem. Int. Ed. 45 3611 [12] Brown C L et al 2002 J. Am. Chem. Soc. 124 6846 [13] Sherratt M J et al 2004 Biophys. J. 86 3211 [14] Li X J et al 2003 J. Vac. Sci. Technol. B 21 1070 [15] Watson J D and Crick F H 1953 Nature 171 737 [16] Lyubchenko Y L et al 1993 Nucleic Acids Res. 21 1117 [17] Bustamante C et al 1997 Curr. Opin. Struct. Biol. 7 709 [18] Shaiu W L et al 1993 Nucleic Acids Res. 21 99 [19] Hu J et al 1995 Science 268 267 [20] Hu J et al 1995 Appl. Phys. Lett. 67 476 [21] Zhou X F et al 2005 Phys. Rev. E 71 062901 [22] Zhou X F et al 2005 Chem. Lett. 134 1488 [23] Zhang L J and Wang H B 2006 Chin. Phys. Lett. 23 2315 [24] Moreno-Herrero F et al 2003 Ultramicroscopy 96 167 [25] Pastre D et al 2003 Biophys. J. 85 2507 [26] Jiang X H and Lin X Q 2004 Electrochem. Commun. 6 873 [27] Vaddiraju S et al 2005 Nano. Lett. 5 1625 |
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