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Influence of Monomer Types on Designability of a Protein-Model
Chain |
LIANG Hao-Jun;WANG Yuan-Yuan |
The Open Laboratory for Bond-Selective Chemistry, Department
of Polymer Science and Engineering, University of Science and Technology of China, Hefei 230026 |
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Cite this article: |
LIANG Hao-Jun, WANG Yuan-Yuan 2002 Chin. Phys. Lett. 19 1382-1384 |
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Abstract In a three-dimensional off-lattice model, the method of Shakhnovich and Gutin for minimizing the Hamiltonian is applied to the design of a protein-model chain. The effect of the number of hydrophobic and hydrophilic monomer types on the designability of a protein-model chain is investigated. The simulation results reveal that the number of hydrophobic monomer types is a much more important factor than that of the polar monomer types in the design of a protein-model chain.
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Keywords:
87.15.He
87.15.Cc
87.15.Aa
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Published: 01 September 2002
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