Composition Preference of Amino Acids in Model-Proteins
WANG Jian-Yong, WANG Jun, WANG Wei
National Laboratory of Solid State Microstructure and Department of Physics, Nanjing University, Nanjing 210093
Composition Preference of Amino Acids in Model-Proteins
WANG Jian-Yong;WANG Jun;WANG Wei
National Laboratory of Solid State Microstructure and Department of Physics, Nanjing University, Nanjing 210093
关键词 :
87.15.Cc ,
87.15.Aa ,
87.14.Ee
Abstract : The folding behaviour of some sequences of 36 monomers with different proportion of hydrophobic residues in a three-dimensional lattice based on the Miyazawa-Jernigen interaction matrix. It is found that the sequences with good folding properties are those with an optimal number of hydrophobic residues, neither too many nor too few. The reason for the deterioration of folding properties of sequences out of this range has also been analysed.
Key words :
87.15.Cc
87.15.Aa
87.14.Ee
出版日期: 2001-03-01
引用本文:
WANG Jian-Yong;WANG Jun;WANG Wei. Composition Preference of Amino Acids in Model-Proteins[J]. 中国物理快报, 2001, 18(3): 449-451.
WANG Jian-Yong, WANG Jun, WANG Wei. Composition Preference of Amino Acids in Model-Proteins. Chin. Phys. Lett., 2001, 18(3): 449-451.
链接本文:
https://cpl.iphy.ac.cn/CN/
或
https://cpl.iphy.ac.cn/CN/Y2001/V18/I3/449
[1]
Waqar Ahmad;Musa Kaleem Baloach. Monte Carlo Study of CO--NO Catalytic Surface Reaction Including CO--CO Repulsion [J]. 中国物理快报, 2006, 23(4): 1034-1037.
[2]
A. U. Qaisrani;M. Khalid;M. K. Khan. Effect of Precursor Mechanism on CO--NO Catalytic Reaction on Body-Centred Cubic Structure: Monte Carlo Simulation [J]. 中国物理快报, 2005, 22(9): 2422-2425.
[3]
GAO De;JI Qing;Lü Gang. How Is a Protein Molecule Nearsighted? [J]. 中国物理快报, 2005, 22(9): 2440-2442.
[4]
ZHANG Wei;SUN Zhi-Bo;ZOU Xian-Wu. Designability of Protein Structures on the Hexagonal Lattice Model [J]. 中国物理快报, 2005, 22(8): 2133-2136.
[5]
ZUO Guang-Hong;ZHANG Jian;WANG Jun;WANG Wei. Folding Behaviour for Proteins BBL and E3BD with Go-like Models [J]. 中国物理快报, 2005, 22(7): 1809-1812.
[6]
M. Khalid;A. U. Qaisrani;W. Ahmad. Non-Thermal Effects on CO--NO Surface Catalytic Reaction on Square Surface: Monte Carlo Study [J]. 中国物理快报, 2005, 22(6): 1533-1535.
[7]
LI Jie;WANG Jun;WANG Wei. Scaling Behaviour of Conserved Sites in Protein Families [J]. 中国物理快报, 2005, 22(5): 1274-1277.
[8]
FENG Juan;ZHUO Yi-Zhong;. Master Equation Approach to Molecular Motor’s Directed Motion [J]. 中国物理快报, 2005, 22(2): 503-506.
[9]
GU Fang;WANG Hai-Jun;. Translocation of Single Polymer Chain from Nanopore on a Membrane: Solvent Effect [J]. 中国物理快报, 2005, 22(10): 2549-2552.
[10]
XU Wei-Xin;WANG Jun;WANG Wei. Protein Folding in Nano-Sized Cylinders [J]. 中国物理快报, 2005, 22(1): 258-261.
[11]
A U. Qaisrani;M. Khalid;Musa Kaleem Baloch. Phase Diagram of Catalytic Oxidation of CO on the Surface--Subsurface of a Body-Centred Cubic Structure with Eley--Rideal Process: A Monte Carlo Simulation [J]. 中国物理快报, 2004, 21(9): 1838-1841.
[12]
JIA Ya;YANG Li-Jian;WU Dan;LIU Quan;ZHAN Xuan. Noise-Induced Bursting and Coherence Resonance in Minimal Cytosolic Ca2+ Oscillation Model [J]. 中国物理快报, 2004, 21(8): 1666-1669.
[13]
CEN Yan;MA Jiong;ZHU Rong-Yi;LU Jun-Jun;QIAN Shi-Xiong;CHEN Ji-Yao;. Femtosecond Time-Resolved Absorption of Oxyhaemoglobin Photolysis in Living Erythrocytes [J]. 中国物理快报, 2004, 21(8): 1636-1639.
[14]
M. Khalid;K. M. Khan;A. U. Qaisrani;Q. N. Malik. Effect of Ballistic-Type Hot Atom Adsorption Mechanism on the Phase Diagram of Monomer-Dimer CO-O2 Surface Catalytic Reaction: A Monte Carlo Simulation [J]. 中国物理快报, 2004, 21(6): 1171-1174.
[15]
HUANG Yu-Hua;ZHAO You-Yuan;OU-YANG Xiao-Ping;LI Fu-Ming;DING Jian-Dong;LI Qing-Guo. A Model for Light-Driven Proton Pump and Transfer in Bacteriorhodopsin [J]. 中国物理快报, 2003, 20(6): 959-961.