Chin. Phys. Lett.  2010, Vol. 27 Issue (9): 098701    DOI: 10.1088/0256-307X/27/9/098701
CROSS-DISCIPLINARY PHYSICS AND RELATED AREAS OF SCIENCE AND TECHNOLOGY |
Synergistic Effect of Auto-Activation and Small RNA Regulation on Gene Expression

XIONG Li-Ping1, MA Yu-Qiang1,2, TANG Lei-Han3

1National Laboratory of Solid State Microstructures, Nanjing University, Nanjing 210093 2Laboratory of Soft Condensed Matter Physics and Interdisciplinary Research, Soochow University, Suzhou 215006 3Department of Physics, Hong Kong Baptist University, Kowloon Tong, Hong Kong
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XIONG Li-Ping, MA Yu-Qiang, TANG Lei-Han 2010 Chin. Phys. Lett. 27 098701
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Abstract

Auto-activation and small ribonucleic acid (RNA)-mediated regulation are two important mechanisms in controlling gene expression. We study the synergistic effect of these two regulations on gene expression. It is found that under this combinatorial regulation, gene expression exhibits bistable behaviors at the transition regime, while each of these two regulations, if working solely, only leads to monostability. Within the stochastic framework, the base pairing strength between sRNA and mRNA plays an important role in controlling the transition time between on and off states. The noise strength of protein number in the off state approaches 1 and is smaller than that in the on state. The noise strength also depends on which parameters, the feedback strength or the synthesis rate of small RNA, are tuned in switching the gene expression on and off. Our findings may provide a new insight into gene-regulation mechanism and can be applied in synthetic biology.

Keywords: 87.16.Yc      87.18.Tt     
Received: 16 March 2010      Published: 25 August 2010
PACS:  87.16.Yc (Regulatory genetic and chemical networks)  
  87.18.Tt (Noise in biological systems)  
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https://cpl.iphy.ac.cn/10.1088/0256-307X/27/9/098701       OR      https://cpl.iphy.ac.cn/Y2010/V27/I9/098701
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XIONG Li-Ping
MA Yu-Qiang
TANG Lei-Han
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